retrieving reviewed sequences from Uniprot

Hi Asma - I’m just cc-ing Jalview discuss so others can find the answer to your question !

when i open the box to fetch sequences from Uniprot, i want only to fetch the reviewed sequences, how can i do that.

First make sure the ‘ALL’ option is selected (it is by default) in the uniprot sequence fetcher. To limit the result of a query to just the sequences that have been reviewed add ‘reviewed:yes’ - eg.

homogentisate AND reviewed:yes

A quick intro to the uniprot query language is included in jalview’s help:

Happy Jalviewing…


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On 06/05/2019 13:18, AL-MURTADHA Asma wrote: