Release notes

Just noticed the link to “Omit hidden regions in Overview” had the wrong url. Corrected and pushed to develop.

Still not in the release notes, should they be?

  • 30x speed and memory improvement for large PCA (JAL-2379)

  • new Tree/PCA dialog (JAL-1632)

  • ability to drag a score matrix onto an alignment (JAL-2416)

…and (trivial/internal)…

  • overview (with features) custom gap colour (JAL-2589)

  • interface for FileFormatI (JAL-2344)

Mungo

The University of Dundee is a registered Scottish Charity, No: SC015096

···

Email signature

University of Dundee shield logo

Mungo Carstairs
Jalview Computational Scientist

The Barton Group
Division of Computational Biology

School of Life Sciences

University of Dundee, Dundee, Scotland, UK

www.jalview.org

www.compbio.dundee.ac.uk
g.m.carstairs@dundee.ac.uk

University of Dundee FacebookUniversity of Dundee TwitterUniversity of Dundee LinkedInUniversity of Dundee YouTubeUniversity of Dundee InstagramUniversity of Dundee Snapchat
We’re Scottish University of the Year again!
The Times / Sunday Times Good University Guide 2016 and 2017

You’re ever helpful, Mungo. FYI - issues that are ‘Resolved’ but not ‘Closed’ have not been added to the release notes. I’ve been clearing off the 12 or so issues on 2.10.2 that were stuck as ‘In Progress’ before dealing with the easy ones!

Just noticed the link to “Omit hidden regions in Overview” had the wrong url. Corrected and pushed to develop.

Thanks!

ls30857:jalview jprocter$ git show f9a19072ea0a4bfbd4bddbd28994211e3ac10951
commit f9a19072ea0a4bfbd4bddbd28994211e3ac10951
Author: gmungoc g.m.carstairs@dundee.ac.uk

JAL-2418 corrected link url for “overview” target

diff --git a/help/help.jhm b/help/help.jhm
index 54cce2a…363f549 100755
— a/help/help.jhm
+++ b/help/help.jhm
@@ -153,7 +153,7 @@

- + @@ -161,5 +161,5 @@

OK. Another link appeared broken too there.

Still not in the release notes, should they be?

  • 30x speed and memory improvement for large PCA (JAL-2379)

is 30x a robust benchmark result ? I would normally only say 'PCA implementation has been made faster and more memory efficient" unless we can provide solid benchmarks.

  • ability to drag a score matrix onto an alignment (JAL-2416)

yeah… still not happy with the UX for this one, but it’ll go in since its already merged.

j.

···

On 02/08/2017 15:06, Mungo Carstairs (Staff) wrote: