(no subject)

Hi there,

I am using jalview development version. I build it using netbeans IDE.

The problem is that I cant connect to any URLs, I get this error:

java.net.SocketTimeoutException: connect timed out
at java.net.PlainSocketImpl.socketConnect(Native Method)

meanwhile I can connect to webservices using the java web start and running the jar file

Do you have any idea what is the cause of this problem?

I have to add that in my project I havent added any special libraries to conflict with the
currently jalview’s libraries

thanks

Elham,

Hi Elham - it sounds like you have managed to sort most of the issues with building Jalview with Netbeans.

The problem is that I cant connect to any URLs, I get this error:

java.net.SocketTimeoutException: connect timed out
at java.net.PlainSocketImpl.socketConnect(Native Method)

Can you provide a complete stacktrace ? And is this for all URLs ? (ie via the sequence fetcher, DAS registry, DAS annotation, and webservices).

meanwhile I can connect to webservices using the java web start and running the jar file

Do you have any idea what is the cause of this problem?

Difficult to say. Its possible that your machine’s firewall is preventing connections from any process managed by NetBeans.

I have to add that in my project I havent added any special libraries to conflict with the
currently jalview’s libraries

ok. good to know.

Jim.

···

On 26/03/2010 07:28, elham gharazi wrote: