Jalview PCA

Jalview Discussion
1

Hello all,

I’m using the PCA analysis feature in Jalview 2.5.1. For small data sets I can retrieve the resulting matrices. However I am unable to for larger data sets – it gives me a blank output file even though the data is plotted. Is there a way to extract the output?

Thanks,
Elizabeth Kim

2

Hi Elizabeth.

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J. B. Procter  (JALVIEW/ENFIN)  Barton Bioinformatics Research Group
Phone/Fax:+44(0)1382 388734/345764  [http://www.compbio.dundee.ac.uk](http://www.compbio.dundee.ac.uk)
The University of Dundee is a Scottish Registered Charity, No. SC015096.
3

Hello Elizabeth.

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J. B. Procter  (JALVIEW/ENFIN)  Barton Bioinformatics Research Group
Phone/Fax:+44(0)1382 388734/345764  [http://www.compbio.dundee.ac.uk](http://www.compbio.dundee.ac.uk)
The University of Dundee is a Scottish Registered Charity, No. SC015096.