Hello there Jalview Users,
We are pleased to announce that Jalview 2.1 is now available to download from http://www.jalview.org
The new features in the Jalview 2.1 are:
* MAFFT Multiple Alignment in default Web Service list
* DAS Feature fetching
* Hidden Sequences, Hidden Columns
* Annotation / Features export
* GFF file reading / writing
* Add sequences to existing alignment
* Wrap alignment as a preference
* Recently opened files / URL lists
* Associate structures with sequences from local PDB files
* Applet can launch the full application
* Applet has transparency for features
* Applet has user defined colours
* Applet can be fed sequences as parameters
Issues resolved:
* Redundancy Panel reinstalled in the Applet version
* Monospaced font - EPS / rescaling bug fixed
* Annotation files with sequence references bug fixed
Let us know what you think of the updates!!