biojs msa adaptors package

Jalview Developers
1

Hi All.

I just bumped into Guy Yachdav (BioJS/PredictProtein in The Rost group) and he mentioned David Dao and Seb Wilzbach's repo of adapters for the msa component: http://biojs.io/d/msa-tnt

Definitely worth taking a look - we should also create a node plugin for generating jalview flavour JSON.
j.

2

Hi Jim, all,

I have Node.js code for JPred (and-the-new-PrC/C) creating JSONs - in
case my experience with this could be useful.

All the best,
Alexey

···

On 10/07/2015 11:24, Jim Procter wrote:

Hi All.

I just bumped into Guy Yachdav (BioJS/PredictProtein in The Rost group)
and he mentioned David Dao and Seb Wilzbach's repo of adapters for the
msa component: http://biojs.io/d/msa-tnt

Definitely worth taking a look - we should also create a node plugin for
generating jalview flavour JSON.
j.
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--
Dr. Alexey Drozdetskiy
Senior Postdoctoral Research Assistant
The Barton Group
Division of Computational Biology
College of Life Sciences
University of Dundee, DD1 5EH, Dundee, Scotland, UK.
Tel:+44 1382 88731
www.compbio.dundee.ac.uk

The University of Dundee is registered Scottish charity: No.SC015096

The University of Dundee is a registered Scottish Charity, No: SC015096

3

it will definitely be useful.. Tochukwu: I saw you'd added documentation to the jalview/examples directory.. wondering if that shouldn't be over at our github repo for biojson instead.. ?

···

On 10/07/2015 11:35, Alexey Drozdetskiy wrote:

I have Node.js code for JPred (and-the-new-PrC/C) creating JSONs - in
case my experience with this could be useful.

All the best,
Alexey

On 10/07/2015 11:24, Jim Procter wrote:

Hi All.

I just bumped into Guy Yachdav (BioJS/PredictProtein in The Rost group)
and he mentioned David Dao and Seb Wilzbach's repo of adapters for the
msa component: http://biojs.io/d/msa-tnt

Definitely worth taking a look - we should also create a node plugin for
generating jalview flavour JSON.
j.
_______________________________________________
Jalview-dev mailing list
Jalview-dev@jalview.org
http://www.compbio.dundee.ac.uk/mailman/listinfo/jalview-dev

--
Dr. Alexey Drozdetskiy
Senior Postdoctoral Research Assistant
The Barton Group
Division of Computational Biology
College of Life Sciences
University of Dundee, DD1 5EH, Dundee, Scotland, UK.
Tel:+44 1382 88731
www.compbio.dundee.ac.uk

The University of Dundee is registered Scottish charity: No.SC015096

The University of Dundee is a registered Scottish Charity, No: SC015096
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Jalview-dev mailing list
Jalview-dev@jalview.org
http://www.compbio.dundee.ac.uk/mailman/listinfo/jalview-dev