When I start Jalview with USER_DEFINED_COLOURS=some-file in the .jalview_properties file I get the warning:
log4j:WARN No appenders could be found for logger (org.exolab.castor.xml.ValidationContext).
log4j:WARN Please initialize the log4j system properly.
Everything seems to work OK but I thought I just mention this.
-Danny
Danny Rice wrote:
When I start Jalview with USER_DEFINED_COLOURS=some-file in the .jalview_properties file I get the warning:
log4j:WARN No appenders could be found for logger (org.exolab.castor.xml.ValidationContext).
log4j:WARN Please initialize the log4j system properly.Everything seems to work OK but I thought I just mention this.
this is normal... its an unfortunate side effect of the way in which Jalview intialises the loggers, and I probably won't fix it until Jalview undergoes its next major refactoring (yes - that's planned for next year).
Jim.