When you do a clustal alignment, the returned alignment re-orders the sequences. Is it possible to maintain the order that we started with?
G.
After thinking about this, and our chat, I've added a todo feature to
the mantis.
Basically, I'll add an 'ordering object' to the internal jalview
datamodel, and different orderings can be selected from the pulldown
menu - by default the sequences will be returned in the order they were
sent, but the 'clustal-W' ordering can also be recovered.
j.
ยทยทยท
On Mon, 11 Apr 2005 13:50:00 +0100 (GMT Daylight Time) Geoff Barton <geoff@compbio.dundee.ac.uk> wrote:
When you do a clustal alignment, the returned alignment re-orders the
sequences. Is it possible to maintain the order that we started with?G.
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J. B. Procter (VAMSAS Project) Barton Bioinformatics Research Group
Phone: +44 (0)1382 348734 http://www.compbio.dundee.ac.uk