Jalview does not provide any tree search algorithms such as maximum likelihood or Bayesian inference right now. The built in algorithms are distance based: neighbour joining and upgma; sufficient for inspection but not sufficiently rigorous for publication.
You can import trees calculated with other programs, however.
Hope this helps ! Happy jalviewing,
Sent from my android device.
From: Maye Villarreal firstname.lastname@example.org
To: “email@example.com” firstname.lastname@example.org
Sent: Fri, 28 Jul 2017 6:31 PM
Subject: About phylogenetic trees
¡Hello! my name is Mayela and I have a question.
How the phylogenetic trees are generated with this program?
I mean maximum likehood, bayesian?
Hope you can help me.